Publications

Engineering optical systems to discover how brains learn, process, and remember information

Light-Field Deep Learning Enables High-Throughput, Scattering-Mitigated Calcium Imaging

CL Howe*, KLY Zhao*, H Verinaz-Jadan*, P Song, SJ Barnes, PL Dragotti, AJ Foust
PNAS, 2025

Model-Based Explainable Deep Learning for Light-Field Microscopy Imaging

P Song, H Verinaz Jadan, CL Howe, AJ Foust, PL Dragotti
IEEE Transactions on Image Processing, 2024

Physics-Based Deep Learning for Imaging Neuronal Activity via Two-Photon and Light Field Microscopy 

H Verinaz-Jadan, CL Howe, P Song, F Lesept, J Kittler, AJ Foust, PL Dragotti
IEEE Transactions on Computational Imaging, 2023

Comparing synthetic refocusing to deconvolution for the extraction of neuronal calcium transients from light fields

CL Howe, P Quicke, P Song, H Verinaz Jadan, PL Dragotti, AJ Foust
Neurophotonics, 2022

Light-Field Microscopy for the Optical Imaging of Neuronal Activity: When model-based methods meet data-driven approaches 

P Song, H Verinaz Jadan, CL Howe, AJ Foust, PL Dragotti
IEEE Signal Processing Magazine, 2022

Shift-Invariant-Subspace Discretization and Volume Reconstruction for Light Field Microscopy Subcellular resolution 3D light field imaging with genetically encoded voltage indicators 

H Verinaz Jadan, P Song, CL Howe, AJ Foust, PL Dragotti
IEEE Transactions on Computational Imaging, 2022

Voltage imaging reveals the dynamic electrical signatures of human breast cancer cells

P Quicke*, Y Sun*, M Arias-Garcia, M Beykou, CD Acker, MBA Djamgoz, C Bakal, AJ Foust
Communications Biology, 2022

Subcellular resolution 3D light field imaging with genetically encoded voltage indicators

P Quicke, CL Howe, P Song, H Verinaz Jadan, C Song, T Knöpfel, M Neil, PL Dragotti, SR Schultz, AJ Foust
Neurophotonics, 2020

3D localization for light-field microscopy via convolutional sparse coding on epipolar images

P Song, H Verinaz Jadan, CL Howe, P Quicke, AJ Foust, PL Dragotti
IEEE Transactions on Computational Imaging, 2020

Single-neuron level one-photon voltage imaging with sparsely targeted genetically encoded voltage indicators

P Quicke, C Song, EJ McKimm, MM Milosevic, CL Howe, M Neil, SR Schultz, SD Antic, AJ Foust, T Knöpfel
Frontiers Cellular Neuroscience, 2019

All-optical crosstalk-free manipulation and readout of Chronos-expressing neurons

NS Soor, P Quicke, CL Howe, KT Pang, MAA Neil, SR Schultz, AJ Foust
Journal of Physics D: Applied Physics, 2019

High speed functional imaging with source localized multifocal two-photon microscopy

P Quicke, S Reynolds, M Neil, T Knöpfel, SR Schultz, AJ Foust
Biomedical Optics Express, 2018